Webgility x QuickBooks Desktop

Automate accounting, inventory and payout reconciliation

by Webgility · Launched: May 2013

4.9 (473) on Shopify Built for Shopify

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No Bookkeeping Errors with real-time Sync for orders, inventory, payouts & more - QuickBooks Desktop

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About Webgility x QuickBooks Desktop

If you're managing Shopify alongside Amazon, eBay, or Walmart and you're still manually entering orders into QuickBooks Desktop, your books are wrong and you know it.Webgility syncs every channel to QuickBooks Desktop automatically. Orders, inventory, payouts, fees, taxes, and reconciliation, all synced in real time, without a single manual entry. Businesses running 3+ channels and 500+ orders a month use Webgility to close their books in hours, not days. Every order, refund & fee posts to QuickBooks : exactly as your accountant needs Match Shopify payouts to QuickBooks automatically : no more reconciliation chaos Zero manual entry into QuickBooks : one fat-finger mistake breaks your whole P&L Sell across Shopify, Amazon & eBay : inventory updates the instant a sale closes POs, net terms & two-way payment sync : B2B and DTC running clean from one place Show more Show less

Last verified: July 17, 2026 · Fresh

App details

Developer: Webgility
Category: Store management
Pricing: Paid
Launched: May 2013
Rating: 4.9 (473) on Shopify

Key features

500 orders per month
1 Sales Channels
3 months historical data
1000 orders per month
2 sales channels

Integrations with:

Amazon, Magento, QuickBooks, Walmart, WooCommerce, eBay

4 plans · 15-day free trial

Plus

$139/month

Advanced

$249/month

Premium

$499/month

Complete

$749/month

Plans and prices as listed on the Shopify App Store.

Ratings & reviews

based on 87 Shopify App Store reviews

Use the arrows to read individual reviews

Great customer support, easy to use once ypu have the proper training, this is a valuable tool for our business.

— Rene Ruiz Collection

Working with Faizan to get our new Shopify store, Cool Running Air Conditioners & More, connected to our QuickBooks Desktop has been a very good experience. He knows QuickBooks very well and the connection process with smooth and correctly configured. I would highly recommend using Webgility of you are using QuickBooks desktop.

— Cool Running Air Conditioners & More

We are very pleased with the Webgility application for QuickBooks Desktop. It has been a great solution for our business and works very well with our QuickBooks system. We also greatly appreciate Mr. Faizan's outstanding support in connecting and setting up Webgility with our QuickBooks. He configured the system efficiently and provided thorough training with professionalism, patience, and clear e...

— Proje Premium Car Care

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— BELA PURE NAURAL SOAPS AND ODOR ELIMINATING HOME FRAGRANCES

We're very happy with the experience and expertise of our support agent Faizan. He's very knowledgeable and patient with us on connecting all our channels for a seamless transition.

— Proje Products

Overall, Webgility is doing what it's meant to do for us. We have it currently integrating the transactions for our Amazon accounts and are now working on also syncing our Shopify stores, so that all transactions process into Quickbooks automatically. The setup to get everything working the way we'd like did take some time, but Faizan and Webgility's support team have definitely been good in worki...

— Australian Botanical Soap US

We sell product at both the wholesale and retail level using Shopify, Magento and Quickbooks. Webgility has been a huge asset to our operation. It's intuitive and customer support is on-point.

— Kink BMX

We were using a different product, but it could not handle our needs. We have 4 different sites with a mix of Magento and Shopify. We did our research and found Webgility handled our stores better in reguards to sync'ing with Quickbooks, Enterprise Desktop with advance inventory. It is always nervous changing programs, but we went for it. It took about a month to set up and get going but we are u...

— Cinema BMX

Faizan was very good, nice introduction meeting

— viandersales

Arun has helped out quite a bit. We are appreciative of his help and continued support

— Lexicon Medical Supply

We have been using Webgility for over a year and it has greatly improved our productivity. I highly recommend Webgility for its functionality and customer support. We recently added two more sales channels. Set up was easy thanks to the help from Arun. He is knowledgeable and very personable. He listened to our needs and set up our system perfectly!

— BE

Webgility is great, we enjoy working with Arun!

— Wall Control

Great help onboarding and training.

— POWERHOUSE HOBBIES

Faizan, was great to deal with to get our 2 stores integrated to Quickbooks desktop! The integration works great and saves a ton of time.

— Everyday Karas

Arun was very helpful in getting my webgility setup back to functional after I upgraded to Quickboooks Desktop Enterprise. I didn't realize that Quickbooks upgrade would erase some of my webgility settings, but it did. Arun dove right in and got me back to 100% functional. I sleep better knowing that webgility is getting my Shopify sales and customer info into Quickbook accurately.

— RocketMusic

Arun has been exceptional with integrating Webgility to QuickBooks. He has been very patient with my questions and his instructions have been clear. He is friendly and super easy to work with. I highly recommend Webgility and Arun.

— DEX FingerLight

Faizan was wonderful to work with. He made setting up the connection with Quickbook's easy and fast.

— BIGshot Archery

Webgility has proven to be not only a powerful platform that will save our company a significant amount of time, but any company is only as good as it's people and working with Faizan Sheikh and Rajeshwari Sonna has been a real pleasure. They are both extremely knowledgeable, helpful, professional and friendly all at the same time! In today's tech world that relies so heavily on only "chat" window...

— Modern Quilt Co.

The Webgility support agent was very knowledgeable and helpful in setting up our account for Shopify Payments and showing me how to download payouts. I would just have liked more explanation of why certain settings were being chosen and what the effect of each setting is to gain a better understanding of functionality.

— 3D Molecular Designs